ncibtep@nih.gov

Bioinformatics Training and Education Program

Pathway Analysis using Ingenuity IPA

Pathway Analysis using Ingenuity IPA

 When: Oct. 13th, 2015 9:30 am - 4:30 pm

To Know

Where:
FAES Room 2 – B1C209
Organizer:
BTEP
Presented By:
Devendra Mistry (QIAGEN)
Class Files:
This class has ended.

About this Class

Ingenuity IPA® is the industry leading software solution to model, analyze, and understand complex biological and chemical systems foundational to human health and disease. Quickly identify biological relationships, mechanisms, pathways, functions and diseases most relevant to experimental datasets. IPA is cited in >10,000 peer-reviewed articles.


PLEASE NOTE: This 1 day workshop is  a BYOC (Bring your own laptop Computer) class.  Government issued or personal computers are permitted. We will be able to supply a very limited set of computers, so if you want to take the class but cannot bring your own computer please indicate such in the Comment section on the registration form.


Morning Session (9:30 AM – 12:30 PM)  Ingenuity IPA -  Basic Training 

(Dev Mistry, Ph.D. - Ingenuity Pathway Analysis)

Getting Started

  • Fundamentals of IPA
  • Overview of key features
  • Search & Pathway Building
  • Advanced Search
  • Building & editing pathways
  • Using Build & Overlay tools

Afternoon Session - (1:30 PM – 4:30 PM)  Ingenuity IPA -  Data Analysis

(Dev Mistry, Ph.D. - Ingenuity Pathway Analysis)

Dataset Analysis 

  • Data Upload & Analysis
  • Interpretation of Gene, Transcript, Protein & Metabolite Data
  • Pathway Analysis & Canonical Pathways
  • Downstream Effects &vInterpreting the Heat Map
  • Upstream Regulators & Regulator Effects Analysis
  • Interpreting networks
  • Comparison & multiple observations analysis

     

Files

  • IPA-Dev-Overview-Oct-2015.pdf: |