Pipelines and QC: Does the mouse genome have a blacklist file? Questions › Category: ChIP-Seq Data Analysis › Pipelines and QC: Does the mouse genome have a blacklist file? 0 Vote Up Vote Down stonelakeak@nih.gov Staff asked 3 years ago Does the mouse genome have a blacklist file? 1 Answers 0 Vote Up Vote Down stonelakeak@nih.gov Staff answered 3 years ago Yes, all reference genomes hg19/hg38/mm9/mm10 have published blacklists. Please login to submit your answer Login