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ncibtep@nih.gov

Bioinformatics Training and Education Program

april, 2022

20apr11:00 am12:00 pmTraining: Access GEO, SRA, ArrayExpress, TCGA, GTEx and more with Qiagen IPA Land ExplorerBTEP Software Showcase

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Event Details

Qiagen IPA Land Explorer links out to the OmicSoft “Land” collections of disease-relevant datasets (>500,000 samples) directly from within IPA to:

  • Explore sample-level data expression, variation, fusions, and more from 500,000+ datasets
  • Explore full differential expression results from 100,000+ disease-focused statistical comparisons
  • Quickly create survival plots from thousands of samples, grouped on metadata or ‘Omics data
  • Export ‘Omics and comparison data for downstream analytics

Land Explorer can help you answer questions like below and more

  • How is a gene/protein expressed across different diseases, tissues, cell type and other groups of interest?
  • How does expression of target gene correlate with expression of other genes?
  • For a gene what mutation, CNV and fusion information can I get from TCGA?
  • Is the survival of cohorts different if they have high vs low expression of a gene or mutant vs wild type allele for a gene?
  • Which genes are expressed in responders vs non-responders for a drug treatment?

Meeting Link: https://cbiit.webex.com/cbiit/j.php?MTID=m6a4ca1b5d634700c3ad9c7e6c1b45b72

Register Here

Register Here

Time

(Wednesday) 11:00 am - 12:00 pm

Organizer

BTEPBioinformatics Training and Education Program, CCR, NCIncibtep@nih.gov

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