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Bioinformatics Training and Education Program

june, 2021

30jun10:00 am11:00 amSingle Cell RNA-Seq Data Analysis in Partek Flow

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Event Details

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Speaker: Uchenna Emechebe, Ph.D., Field Application Scientist, Partek Incorporated.

Partek® Flow® bioinformatics software which is available to NCI researchers provides a singular environment that enables the analysis and visualization of NGS data with no programming or command line expertise. Join us for these two online sessions where a Partek® scientist will demonstrate how to pre-process, analyze, and visualize Bulk RNA-Seq and/or Single Cell RNA-Seq data using Partek Flow’s point and click features.

During this session, attendees will learn how to perform QA/QC, custom filtration of single cell datasets, normalization, clustering and classification, biological interpretation and visualization of results using UMAP, t-SNE, volcano plots.
In addition, attendees of the webinar will:
• Become familiar with various single cell normalization and batch correction methods.
• Learn how to summarize gene expression values across different subsets of cells for any given set of genes and visualize the results using a bubble plot or a heat map.

Time

(Wednesday) 10:00 am - 11:00 am

Location

Online

Organizer

CBIITCBIIT

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