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ncibtep@nih.gov

Bioinformatics Training and Education Program

june, 2022

15jun11:00 am12:00 pmPartek Flow: Understanding Single Cell RNA-Seq Data Formats and PreprocessingBTEP Software Showcase

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Event Details

This webinar will discuss the various single cell RNA-Seq data formats and how to process them with Partek Flow.

You will learn about:

  • Single cell data file formats .h5, .fastq, .tsv, .mtx, .bcl
  • Trimming tags
  • Alignment
  • Deduplicating UMI
  • Filtering barcodes (cells)
  • Knee plots
Meeting link:
https://cbiit.webex.com/cbiit/j.php?MTID=m6916d6f765f43c8bf2118659530bf0dd 
Meeting number:
2307 014 7918
Password:
r3CAK2FAD9?
Host key:
403057
Cohost:
Alex Emmons; Amy Stonelake; Desiree Tillo; Peter Fitzgerald; Joe Wu; Carl McIntosh
Join by video system
Dial 23070147918@cbiit.webex.com
You can also dial 173.243.2.68 and enter your meeting number.
Join by phone
1-650-479-3207 Call-in number (US/Canada)
Access code: 2307 014 7918
Host PIN: 5225

Register Here

Register Here

Time

(Wednesday) 11:00 am - 12:00 pm

Organizer

BTEPBioinformatics Training and Education Program, CCR, NCIncibtep@nih.gov

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