Topic Bulk RNA-Seq
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Event Details
Powerful and Intuitive Gene Expression Visualization Tools to Interpret Biological Signals – Bulk and Single Cell Data The increasing use of genomic technologies, such as RNA-Seq and single cell RNA-Seq, to
more
Event Details
Powerful and Intuitive Gene Expression Visualization Tools to Interpret Biological Signals – Bulk and Single Cell Data
The increasing use of genomic technologies, such as RNA-Seq and single cell RNA-Seq, to assess gene expression patterns has led to an unprecedented amount of data. For many, the size and complexity of these data sets make it challenging to see the biological signals. But not anymore.
The visualization tools in Partek® Flow® provide the flexibility needed to display gene expression results ready for publication. Our powerful, interactive plots also facilitate novel discovery and provide fast and accurate QAQC. Together with the easy-to-use point and click interface, Partek Flow allows you to answer more questions and move forward with your research.
In this webinar, you will learn how to visualize gene expression data using:
- Feature distribution plots
- Sample correlation plots
- Volcano plots
- Chromosome view
- Dot plots
- Violin plots
- Hierarchical clustering
- PCA
- t-SNE
- Customizable scatterplots
WebEx link: https://cbiit.webex.com/cbiit/j.php?MTID=m634db94c7c42f1eb6dcf1850c27bd2c6
- Meeting number:
- 2310 750 5275
- Password:
- a73JRXKwm?6
- Host key:
- 148776
- Cohost:
- Alex Emmons; Amy Stonelake; Desiree Tillo; Peter Fitzgerald; Joe Wu; Carl McIntosh
- Join by video system
-
Dial 23107505275@cbiit.webex.comYou can also dial 173.243.2.68 and enter your meeting number.
- Join by phone
-
1-650-479-3207 Call-in number (US/Canada)Access code: 2310 750 5275Host PIN: 5225
Register Here
Register HereTime
(Wednesday) 11:00 am - 12:00 pm
Organizer
BTEPBioinformatics Training and Education Program, CCR, NCIncibtep@nih.gov
25may1:00 pm4:00 pmRNA Seq Analysis Training
Event Details
This training will provide an introduction to RNA-seq data analysis followed by tutorials showing the use of popular RNA-seq analysis packages and preparing participants to independently run basic RNA-Seq analysis
more
Event Details
This training will provide an introduction to RNA-seq data analysis followed by tutorials showing the use of popular RNA-seq analysis packages and preparing participants to independently run basic RNA-Seq analysis for expression profiling. The exercise will run on the Galaxy platform using Illumina paired-end RNA-seq data.
Participants will have a chance to: run quality control check on sequencing data; align the sequencing reads to a reference genome; generate alignment statistics and check mapping quality; measure abundance of transcripts; perform differential expression analysis; and visualize the output of RNA-seq analyses.
Register Here
RegisterTime
(Wednesday) 1:00 pm - 4:00 pm
Location
Online
Organizer
NIH Training LibraryNIH Training LibraryJoelle Mornini, joelle.mornini@nih.gov