Course Details

  • Date: May 11th, 2022 - May 11th, 2022
  • Time: 11:00 am - 12:00 pm
  • Location: Online Webinar
  • Presenter(s): Yana Stackpole (Qlucore)

Many new studies include RNA sequencing data. In this webinar we will go through the process of downloading and importing SRA data using the SRA toolkit, how to use an aligner to convert fastq files into BAM files and then how to import and normalize the BAM files in Omics Explorer. We will also show how you can download GEO soft files, TCGA mRNA data from GDAC and import 10X Genomics Cellranger data.

 

Meeting link:
https://cbiit.webex.com/cbiit/j.php?MTID=m1ab9795e00f76ba4641bf19f662d54a9 
Meeting number:
2311 589 3124
Password:
VKwJ4MRg4?7
Host key:
372928
Cohost:
Alex Emmons; Amy Stonelake; Desiree Tillo; Peter Fitzgerald; Joe Wu; Carl McIntosh
Join by video system
Dial 23115893124@cbiit.webex.com
You can also dial 173.243.2.68 and enter your meeting number.
Join by phone
1-650-479-3207 Call-in number (US/Canada)
Access code: 2311 589 3124
Host PIN: 5225