Course Details

  • Date: June 15th, 2021 - June 15th, 2021
  • Time: 3:00 pm - 4:00 pm
  • Location: Online Webinar
  • Presenter(s): Amy Stonelake (BTEP)

This is the last course in a series of three, designed to answer the question:

“I’ve just got my sequence data back from the sequencing center, how do I understand/analyze/work with it?”

Course Three: Working with RNA-Seq data

Who should take this course:
Learners who want to work with Next Gen Sequence Data

Pre-requisites:
Learners should have beginner level skills working in a Unix environment

Learning Objectives:

In this class, learners will:

Align RNA-Seq reads to a genome with several different alignment programs
Visualize aligned RNA-Seq reads with the Integrative Genome Viewer (IGV)
Work with SAM and BAM file formats
Perform differential expression and functional analysis of RNA-Seq data

All classes will be held on WebEx in Amy Stonelake’s Personal Room:

https://cbiit.webex.com/meet/stonelakeak

This class will be held at 3-4 PM on these days.

June 15
June 17
June 22
June 24