Course Details

  • Date: May 11th, 2021 - May 11th, 2021
  • Time: 3:00 pm - 4:00 pm
  • Location: Online Webinar
  • Presenter(s): Amy Stonelake (BTEP), Peter FitzGerald (GAU)

Bioinformatics for Beginners, Post-Bac Edition

This is the second course in a series of three, designed to answer the question:

“I’ve just got my sequence data back from the sequencing center, how do I understand/analyze/work with it?”

Course Two: Bulk RNA-Seq Data Analysis

Who should take this course:
Learners who want to work with Next Gen Sequence Data

Pre-requisites:
Learners should have beginner level skills working in a Unix environment

Learning Objectives:

In this class, learners will:

  1. Understand RNA-Seq experimental design and theory
  2. Analyze bulk RNA-Seq data from public database resources
  3. Perform quality control of bulk RNA-Seq data and understand the output
  4. Align and view RNA-Seq reads against the human genome

All classes will be held on WebEx in Amy Stonelake’s Personal Room:

https://cbiit.webex.com/meet/stonelakeak

This class will be held at 3-4 PM on these days.

Tuesday, May 11
Thursday, May 13
Tuesday, May 18
Thursday, May 20

Course Three will be offered in June. You will receive an email invite to sign up.

For this class, you will need to download and install software:
Download the IGV desktop application and igvtools from: https://software.broadinstitute.org/software/igv/