Course Details

  • Date: October 10th, 2019 - October 10th, 2019
  • Time: 10:00 am - 3:00 pm
  • Location: Building 37, Room 4041/4107
  • Presenter(s): Abdalla Abdelmaksoud (FNLCR), Cihan Oguz (NCBR), Keyur Talsania (CCR-SF IFX Group), Nathan Wong (CCBR), Vicky Chen (CCR-SF IFX Group)

Multiple sample analysis, data integration across multiple experiments, and technologies

10:00 – 11:00 AM scRNA-seq batch effect correction, differential analysis,  gene set enrichment and network analysis (Abdalla Abdelmaksoud, Vicky Chen)

11:05 – 12:00 PM Trajectory analysis (Abdalla Abdelmaksoud)

1:00 –   2:30 PM Single cell integrative analysis from multiple technologies (CITE-seq, cell hashing, VDJ analysis, scATAC-seq) (Nathan Wong, Cihan Oguz, and Keyur Talsania)

2:30 – 3:00 PM Panel Discussion (Q & A)

If unable to join in person, WebEx will be provided.

Meeting number (access code): 732 159 036
Meeting password: 44iZDNP*
Thursday, October 10, 2019
10:00 am  |  (UTC-05:00) Eastern Time (US & Canada)  |  5 hrs
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The link to the WebEx recording of this event is here:

https://cbiit.webex.com/webappng/sites/cbiit/recording/play/7321cf28c97346b8a0b6dc258a0d40a8

 

Course Material 1: PDF icon btep_AA_Trajectory-Analysis.pdf

Course Material 2: PDF icon CITESeq-NW.pdf

Course Material 3: PDF icon Single-Cell-BTEP-MultiSample-Analysis-VC.pdf

Course Material 4: PDF icon cihan_cell_hashing_slides_oct10_fnl.pdf

Course Material 5: PDF icon scATAC_BTEP_desktop_KT.pdf