Bulk RNA-Seq data analysis – learn all about expression counts (raw counts, FPKM, RPKM, TMM, TPM, CPM).
Those of you, who are hands-on with RNA-seq, or even simply reading publications on this know there are different types of expression counts – raw counts, FPKM, RPKM, TMM, TPM, and CPM.
Some of you get a master matrix from your sequencing core with several types of counts calculated for each dataset. We will go over them to help you make better decisions with your data.
This session is designed for biologists who want to learn more about RNA-seq but have no formal training in bioinformatics.
(Public RNA-seq datasets will be used, and the live demo part will be done in Qlucore Omics Explorer.)